PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN04014.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 319aa    MW: 35763.2 Da    PI: 6.3737
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN04014.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH413.4e-13125176155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  KHN04014.1 125 QRMTHIAVERNRRKQMNEYLSVLRSLMPES---YVQRGDQASIIGGAINFVKELE 176
                 79****************************...9******************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.105.8E-14123180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.07E-13123180No hitNo description
PROSITE profilePS5088815.402124175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-16124188IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-10125176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.6E-10130181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MALEAVVYPQ PQDPFGHGIK DPSYNYNNLL EGGGGNWGYA DFNLEKEDRT CVPFLANQTE  60
NYPYGEWNCS PSPPSMLPQL NIASNPQSSE TSNTQNNLDS SVSTPARPKR RRTKSRKNKE  120
EIENQRMTHI AVERNRRKQM NEYLSVLRSL MPESYVQRGD QASIIGGAIN FVKELEQRLQ  180
FLGAQKEKEA KSDVLFSEFF SFPQYSTSAS GGCDNSTAMS EQKCEAQSGI ADIEVTMVES  240
HANLKIRSKK RPKQLLKIVS SLHGMRLTIL HLNVTTTGEI VLYSLSVKVE EDCKLGSVDE  300
IAAAVYQILD RIQQETISN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125136RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-141AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006577251.10.0PREDICTED: transcription factor bHLH94-like
SwissprotQ9C7T45e-83BH096_ARATH; Transcription factor bHLH96
TrEMBLA0A0B2P8V20.0A0A0B2P8V2_GLYSO; Transcription factor bHLH96
STRINGGLYMA03G39990.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-80bHLH family protein
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]